USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: LSM12_HUMAN USC-OGP 2-DE database:  LSM12_HUMAN LSM12_HUMAN General information about the entry View entry in simple text format Entry name LSM12_HUMAN Primary accession number Q3MHD2 Secondary accession number(s) Q96NL5 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Protein LSM12 homolog;. Gene name Name=LSM12 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1287: pI=6.52; Mw=25485 Cross-references UniProtKB/Swiss-Prot Q3MHD2; LSM12_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name LSM12_HUMAN Primary accession number Q3MHD2 Secondary accession number(s) Q86YB1 Q96NL5 Sequence was last modified on  October 2, 2007 (version 2) Annotations were last modified on  November 2, 2016 (version 92) Name and origin of the protein Description RecName: Full=Protein LSM12 homolog; Gene name Name=LSM12 Encoded on Name=LSM12 Keywords Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; Phosphoprotein; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AK055218; BAB70877.1; -; mRNA EMBL BC044587; AAH44587.1; -; mRNA EMBL BC105288; AAI05289.1; -; mRNA CCDS CCDS11475.1; -. [Q3MHD2-1]; . RefSeq NP_689557.1; NM_152344.3. [Q3MHD2-1]; . UniGene Hs.355570; -; . ProteinModelPortal Q3MHD2; -; . BioGrid 125889; 27; . IntAct Q3MHD2; 5; . STRING 9606.ENSP00000293406; -; . iPTMnet Q3MHD2; -; . PhosphoSitePlus Q3MHD2; -; . BioMuta LSM12; -; . DMDM 158705881; -; . EPD Q3MHD2; -; . MaxQB Q3MHD2; -; . PaxDb Q3MHD2; -; . PeptideAtlas Q3MHD2; -; . PRIDE Q3MHD2; -; . DNASU 124801; -; . Ensembl ENST00000293406; ENSP00000293406; ENSG00000161654. [Q3MHD2-1]; . Ensembl ENST00000591247; ENSP00000466718; ENSG00000161654. [Q3MHD2-1]; . GeneID 124801; -; . KEGG hsa:124801; -; . UCSC uc002iev.3; human. [Q3MHD2-1]; . CTD 124801; -; . GeneCards LSM12; -; . H-InvDB HIX0034611; -; . HGNC HGNC:26407; LSM12; . HPA HPA051934; -; . MIM 611793; gene; . neXtProt NX_Q3MHD2; -; . OpenTargets ENSG00000161654; -; . PharmGKB PA142671502; -; . eggNOG KOG4401; Eukaryota; . eggNOG ENOG410Y6A1; LUCA; . GeneTree ENSGT00390000006956; -; . HOGENOM HOG000006611; -; . HOVERGEN HBG057351; -; . InParanoid Q3MHD2; -; . OMA GKPNLND; -; . PhylomeDB Q3MHD2; -; . ChiTaRS LSM12; human; . GenomeRNAi 124801; -; . PRO PR:Q3MHD2; -; . Proteomes UP000005640; Chromosome 17; . Bgee ENSG00000161654; -; . CleanEx HS_LSM12; -; . ExpressionAtlas Q3MHD2; baseline and differential; . Genevisible Q3MHD2; HS; . InterPro IPR019181; Anticodon-binding_dom; . Pfam PF09793; AD; 1; . SMART SM00995; AD; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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